Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Gm12138-201ENSMUST00000122180 951 ntBASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Gm9192-201ENSMUST00000183221 985 ntBASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TwistnbQ78WZ7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Gm6439-201ENSMUST00000199849 862 ntBASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TwistnbQ78WZ7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TwistnbQ78WZ7 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms