Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ubfd1Q78JW9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Mir7076-201ENSMUST00000183519 74 ntBASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Gm8574-201ENSMUST00000203207 924 ntBASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Gm18065-201ENSMUST00000221395 526 ntBASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Olfr584-201ENSMUST00000098210 964 ntBASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.39□□□□□ -0.59
Ubfd1Q78JW9 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Gm16071-201ENSMUST00000119589 793 ntBASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Gm12516-201ENSMUST00000120819 385 ntBASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Gm22138-201ENSMUST00000158748 128 ntBASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.38□□□□□ -0.59
Ubfd1Q78JW9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms