Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm14071-201ENSMUST00000117817 509 ntBASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm24992-201ENSMUST00000157412 130 ntBASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm26976-201ENSMUST00000182929 908 ntBASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm29067-201ENSMUST00000190821 470 ntBASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm44323-201ENSMUST00000198689 129 ntBASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm45856-201ENSMUST00000212752 416 ntBASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Gm11996-201ENSMUST00000117538 915 ntBASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Gm25677-201ENSMUST00000174983 72 ntBASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Gm34379-201ENSMUST00000195036 290 ntBASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Gm9369-201ENSMUST00000196009 733 ntBASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Gm2594-201ENSMUST00000214774 742 ntBASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Gm8894-201ENSMUST00000074642 666 ntBASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.24□□□□□ -0.29
Ddx55Q6ZPL9 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Gm25148-201ENSMUST00000104611 123 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms