Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Gm23432-201ENSMUST00000157181 131 ntBASIC9.9□□□□□ -0.83
Rif1Q6PR54 Gm4310-201ENSMUST00000177847 889 ntBASIC9.9□□□□□ -0.83
Rif1Q6PR54 Gm5808-201ENSMUST00000178090 357 ntBASIC9.9□□□□□ -0.83
Rif1Q6PR54 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.9□□□□□ -0.83
Rif1Q6PR54 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.89□□□□□ -0.83
Rif1Q6PR54 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Gm7833-201ENSMUST00000183288 990 ntBASIC9.89□□□□□ -0.83
Rif1Q6PR54 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Gm18164-201ENSMUST00000213769 927 ntBASIC9.89□□□□□ -0.83
Rif1Q6PR54 Gm18166-201ENSMUST00000215557 927 ntBASIC9.89□□□□□ -0.83
Rif1Q6PR54 Gm6859-201ENSMUST00000218614 989 ntBASIC9.89□□□□□ -0.83
Rif1Q6PR54 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.89□□□□□ -0.83
Rif1Q6PR54 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rif1Q6PR54 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm23582-201ENSMUST00000158530 139 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 AC132384.2-201ENSMUST00000218018 526 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 AC153153.1-201ENSMUST00000225803 793 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm16477-201ENSMUST00000085365 801 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm17415-201ENSMUST00000096427 789 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms