Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf220Q6PDX6 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm11964-201ENSMUST00000120982 444 ntBASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm27847-201ENSMUST00000183711 107 ntBASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm27375-201ENSMUST00000183799 107 ntBASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm9794-201ENSMUST00000202370 423 ntBASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm24136-201ENSMUST00000083374 165 ntBASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms