Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smchd1Q6P5D8 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smchd1Q6P5D8 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.73□□□□□ -0.37
Smchd1Q6P5D8 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smchd1Q6P5D8 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.73□□□□□ -0.37
Smchd1Q6P5D8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smchd1Q6P5D8 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.73□□□□□ -0.37
Smchd1Q6P5D8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smchd1Q6P5D8 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm3828-201ENSMUST00000121817 257 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Cog3-203ENSMUST00000227473 4197 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm23218-201ENSMUST00000158124 276 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm7741-201ENSMUST00000181445 989 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm42518-201ENSMUST00000196277 938 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smchd1Q6P5D8 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Gm12795-201ENSMUST00000117594 539 ntBASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Smchd1Q6P5D8 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smchd1Q6P5D8 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smchd1Q6P5D8 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smchd1Q6P5D8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms