Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Gm15515-201ENSMUST00000117827 822 ntBASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Gm12196-201ENSMUST00000120954 262 ntBASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Casc4Q6P2L7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Casc4Q6P2L7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm12857-201ENSMUST00000117678 592 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm12501-201ENSMUST00000119163 529 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm14441-201ENSMUST00000121960 540 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gm2965-201ENSMUST00000198365 343 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 AU022133-201ENSMUST00000200601 873 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Casc4Q6P2L7 Rgr-203ENSMUST00000225070 4704 ntBASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.82□□□□□ -0.52
Casc4Q6P2L7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms