Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Gm37458-201ENSMUST00000194055 410 ntBASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Gm19009-201ENSMUST00000223072 823 ntBASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm13937-201ENSMUST00000121000 988 ntBASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm6108-201ENSMUST00000208365 367 ntBASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdzrn3Q69ZS0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Gm12628-201ENSMUST00000122193 382 ntBASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Gm3150-201ENSMUST00000166418 204 ntBASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Gm18367-201ENSMUST00000176139 600 ntBASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Gm5298-201ENSMUST00000201122 892 ntBASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdzrn3Q69ZS0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms