Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Ctr9Q62018 Gm11960-201ENSMUST00000122068 925 ntBASIC13.8□□□□□ -0.2
Ctr9Q62018 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ctr9Q62018 Gm15881-201ENSMUST00000148792 942 ntBASIC13.8□□□□□ -0.2
Ctr9Q62018 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.8□□□□□ -0.2
Ctr9Q62018 Gm3150-201ENSMUST00000166418 204 ntBASIC13.8□□□□□ -0.2
Ctr9Q62018 Gm17391-201ENSMUST00000171036 126 ntBASIC13.8□□□□□ -0.2
Ctr9Q62018 Gm43916-201ENSMUST00000205062 967 ntBASIC13.8□□□□□ -0.2
Ctr9Q62018 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.8□□□□□ -0.2
Ctr9Q62018 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ctr9Q62018 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.8□□□□□ -0.2
Ctr9Q62018 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ctr9Q62018 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ctr9Q62018 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ctr9Q62018 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.8□□□□□ -0.2
Ctr9Q62018 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctr9Q62018 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.79□□□□□ -0.2
Ctr9Q62018 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.79□□□□□ -0.2
Ctr9Q62018 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Ctr9Q62018 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.79□□□□□ -0.2
Ctr9Q62018 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.79□□□□□ -0.2
Ctr9Q62018 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.79□□□□□ -0.2
Ctr9Q62018 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.79□□□□□ -0.2
Ctr9Q62018 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ctr9Q62018 Mir3547-201ENSMUST00000175461 88 ntBASIC13.79□□□□□ -0.2
Ctr9Q62018 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Ctr9Q62018 Gm38314-201ENSMUST00000195709 625 ntBASIC13.79□□□□□ -0.2
Ctr9Q62018 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.79□□□□□ -0.2
Ctr9Q62018 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Ctr9Q62018 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ctr9Q62018 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.79□□□□□ -0.2
Ctr9Q62018 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.79□□□□□ -0.2
Ctr9Q62018 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctr9Q62018 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ctr9Q62018 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Ctr9Q62018 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ctr9Q62018 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ctr9Q62018 Gm11836-201ENSMUST00000121022 441 ntBASIC13.78□□□□□ -0.2
Ctr9Q62018 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Gm19459-201ENSMUST00000176240 835 ntBASIC13.78□□□□□ -0.2
Ctr9Q62018 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.78□□□□□ -0.2
Ctr9Q62018 Gm12407-201ENSMUST00000180219 324 ntBASIC13.78□□□□□ -0.2
Ctr9Q62018 Gm7467-201ENSMUST00000185173 652 ntBASIC13.78□□□□□ -0.2
Ctr9Q62018 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.78□□□□□ -0.2
Ctr9Q62018 Gm44506-201ENSMUST00000206278 965 ntBASIC13.78□□□□□ -0.2
Ctr9Q62018 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.78□□□□□ -0.2
Ctr9Q62018 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.78□□□□□ -0.2
Ctr9Q62018 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Ctr9Q62018 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctr9Q62018 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ctr9Q62018 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms