Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gli3Q61602 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gli3Q61602 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 AC154197.1-201ENSMUST00000225136 1382 ntBASIC15.31■□□□□ 0.04
Gli3Q61602 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gli3Q61602 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC15.31■□□□□ 0.04
Gli3Q61602 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Gm14571-201ENSMUST00000118292 570 ntBASIC15.31■□□□□ 0.04
Gli3Q61602 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Gm6038-201ENSMUST00000154310 948 ntBASIC15.31■□□□□ 0.04
Gli3Q61602 Gm23555-201ENSMUST00000157815 135 ntBASIC15.31■□□□□ 0.04
Gli3Q61602 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gli3Q61602 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gli3Q61602 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gli3Q61602 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC15.31■□□□□ 0.04
Gli3Q61602 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC15.31■□□□□ 0.04
Gli3Q61602 Zfp389-202ENSMUST00000224437 1234 ntBASIC15.31■□□□□ 0.04
Gli3Q61602 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.31■□□□□ 0.04
Gli3Q61602 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gli3Q61602 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.3■□□□□ 0.04
Gli3Q61602 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Gli3Q61602 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gli3Q61602 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.3■□□□□ 0.04
Gli3Q61602 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gli3Q61602 Gm13758-201ENSMUST00000118699 743 ntBASIC15.3■□□□□ 0.04
Gli3Q61602 Gm15727-201ENSMUST00000122416 437 ntBASIC15.3■□□□□ 0.04
Gli3Q61602 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Gli3Q61602 Gm5845-201ENSMUST00000195812 796 ntBASIC15.3■□□□□ 0.04
Gli3Q61602 Gm44008-201ENSMUST00000204345 412 ntBASIC15.3■□□□□ 0.04
Gli3Q61602 Gm45308-201ENSMUST00000210610 415 ntBASIC15.3■□□□□ 0.04
Gli3Q61602 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gli3Q61602 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Gli3Q61602 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC15.3■□□□□ 0.04
Gli3Q61602 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gli3Q61602 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gli3Q61602 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Gm23908-201ENSMUST00000104599 132 ntBASIC15.29■□□□□ 0.04
Gli3Q61602 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC15.29■□□□□ 0.04
Gli3Q61602 Gm15033-201ENSMUST00000118188 673 ntBASIC15.29■□□□□ 0.04
Gli3Q61602 Gm14524-201ENSMUST00000121066 683 ntBASIC15.29■□□□□ 0.04
Gli3Q61602 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gli3Q61602 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC15.29■□□□□ 0.04
Gli3Q61602 Gm17107-201ENSMUST00000170983 553 ntBASIC15.29■□□□□ 0.04
Gli3Q61602 Gm17797-201ENSMUST00000182175 997 ntBASIC15.29■□□□□ 0.04
Gli3Q61602 Gm38314-201ENSMUST00000195709 625 ntBASIC15.29■□□□□ 0.04
Gli3Q61602 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gli3Q61602 Gm9790-201ENSMUST00000054148 288 ntBASIC15.29■□□□□ 0.04
Gli3Q61602 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gli3Q61602 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Gm43152-201ENSMUST00000202495 1638 ntBASIC15.29■□□□□ 0.04
Gli3Q61602 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms