Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.81□□□□□ -0.36
Cln3Q61124 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.81□□□□□ -0.36
Cln3Q61124 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cln3Q61124 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Paupar-201ENSMUST00000194826 3482 ntBASIC12.81□□□□□ -0.36
Cln3Q61124 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Gm15528-201ENSMUST00000117821 864 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Gm13351-201ENSMUST00000118087 414 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.8□□□□□ -0.36
Cln3Q61124 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Gm22993-201ENSMUST00000175423 254 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Gm21778-201ENSMUST00000178779 471 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Cln3Q61124 Gm9081-201ENSMUST00000182346 991 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Mir7051-201ENSMUST00000184167 73 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Gm5700-201ENSMUST00000191483 989 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cln3Q61124 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cln3Q61124 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cln3Q61124 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cln3Q61124 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cln3Q61124 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cln3Q61124 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.8□□□□□ -0.36
Cln3Q61124 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.8□□□□□ -0.36
Cln3Q61124 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cln3Q61124 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.8□□□□□ -0.36
Cln3Q61124 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cln3Q61124 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.79□□□□□ -0.36
Cln3Q61124 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cln3Q61124 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Cln3Q61124 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cln3Q61124 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cln3Q61124 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Gm25148-201ENSMUST00000104611 123 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.79□□□□□ -0.36
Cln3Q61124 Gm11560-201ENSMUST00000117567 948 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Gm8111-201ENSMUST00000117659 987 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cln3Q61124 Gm9673-201ENSMUST00000119287 781 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Gm12274-201ENSMUST00000120062 385 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Gm16219-201ENSMUST00000120096 274 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Gm20392-201ENSMUST00000173047 701 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms