Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm7815-201ENSMUST00000196104 832 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm3945-201ENSMUST00000196637 683 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm9523-201ENSMUST00000199146 1159 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 AC129017.2-201ENSMUST00000226118 1284 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Col12a1Q60847 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col12a1Q60847 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Col12a1Q60847 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.2□□□□□ -0.62
Col12a1Q60847 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.2□□□□□ -0.62
Col12a1Q60847 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.2□□□□□ -0.62
Col12a1Q60847 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Col12a1Q60847 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.2□□□□□ -0.62
Col12a1Q60847 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Mir3100-201ENSMUST00000174918 65 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm37723-201ENSMUST00000194480 565 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 Gm38135-201ENSMUST00000195068 502 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 AC133496.1-201ENSMUST00000223891 743 ntBASIC11.2□□□□□ -0.62
Col12a1Q60847 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col12a1Q60847 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col12a1Q60847 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Col12a1Q60847 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Gm5738-201ENSMUST00000206016 779 ntBASIC11.19□□□□□ -0.62
Col12a1Q60847 Gm44908-201ENSMUST00000208610 266 ntBASIC11.19□□□□□ -0.62
Col12a1Q60847 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.19□□□□□ -0.62
Col12a1Q60847 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.19□□□□□ -0.62
Col12a1Q60847 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.19□□□□□ -0.62
Col12a1Q60847 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Col12a1Q60847 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col12a1Q60847 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col12a1Q60847 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm13456-201ENSMUST00000118928 1365 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm23458-201ENSMUST00000083257 169 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms