Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Gm15881-201ENSMUST00000148792 942 ntBASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Gm9550-201ENSMUST00000161130 862 ntBASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.97□□□□□ -0.17
Vps54Q5SPW0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Gm8574-201ENSMUST00000203207 924 ntBASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Gm17825-201ENSMUST00000206836 794 ntBASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Gm9132-201ENSMUST00000210182 832 ntBASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps54Q5SPW0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.97□□□□□ -0.17
Vps54Q5SPW0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Gm11500-201ENSMUST00000118237 601 ntBASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Gm26047-201ENSMUST00000157308 113 ntBASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Gm17391-201ENSMUST00000171036 126 ntBASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Gm26047-202ENSMUST00000198840 115 ntBASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Gm44126-201ENSMUST00000204831 514 ntBASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Gm43916-201ENSMUST00000205062 967 ntBASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.96□□□□□ -0.17
Vps54Q5SPW0 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vps54Q5SPW0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vps54Q5SPW0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms