Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm12028-201ENSMUST00000118065 436 ntBASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm14176-201ENSMUST00000121302 477 ntBASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm8464-202ENSMUST00000146697 1142 ntBASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm4750-201ENSMUST00000151942 1142 ntBASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm23555-201ENSMUST00000157815 135 ntBASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm5982-201ENSMUST00000196234 512 ntBASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Gm18391-201ENSMUST00000217189 658 ntBASIC10.7□□□□□ -0.7
Spg11Q3UHA3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Spg11Q3UHA3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm4294-201ENSMUST00000105169 614 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm12745-201ENSMUST00000121767 214 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm8601-201ENSMUST00000182096 909 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm8725-201ENSMUST00000221829 1333 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm13002-201ENSMUST00000119286 682 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm18733-202ENSMUST00000174447 401 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm26379-201ENSMUST00000178125 138 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Spg11Q3UHA3 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm26047-201ENSMUST00000157308 113 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm23694-201ENSMUST00000179335 110 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm26047-202ENSMUST00000198840 115 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm42821-201ENSMUST00000199771 489 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 AL844586.1-201ENSMUST00000224297 1042 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Zfp389-202ENSMUST00000224437 1234 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms