Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Fndc4Q3TR08 Gm25214-201ENSMUST00000104573 129 ntBASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Gm14832-201ENSMUST00000121289 322 ntBASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Gm24845-201ENSMUST00000158034 109 ntBASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Gm27516-201ENSMUST00000184237 98 ntBASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Gm6621-201ENSMUST00000193251 772 ntBASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Gm30285-201ENSMUST00000214614 422 ntBASIC9.96□□□□□ -0.82
Fndc4Q3TR08 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Gm17383-201ENSMUST00000078739 1041 ntBASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Fndc4Q3TR08 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Gm45331-201ENSMUST00000209868 554 ntBASIC9.95□□□□□ -0.82
Fndc4Q3TR08 AC159896.2-201ENSMUST00000214753 269 ntBASIC9.95□□□□□ -0.82
Fndc4Q3TR08 AC154319.1-201ENSMUST00000216330 312 ntBASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 AL589735.1-201ENSMUST00000224353 270 ntBASIC9.95□□□□□ -0.82
Fndc4Q3TR08 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Fndc4Q3TR08 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms