Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Gm27516-201ENSMUST00000184237 98 ntBASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 AA914427-201ENSMUST00000193194 1166 ntBASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cul4aQ3TCH7 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Btrc-209ENSMUST00000224478 2194 ntBASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm11509-201ENSMUST00000117358 325 ntBASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm14071-201ENSMUST00000117817 509 ntBASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm44651-201ENSMUST00000207343 372 ntBASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm4157-201ENSMUST00000211647 679 ntBASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm9797-202ENSMUST00000218003 294 ntBASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm7940-201ENSMUST00000218195 769 ntBASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Cul4aQ3TCH7 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cul4aQ3TCH7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms