Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ebf1Q07802 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm3793-201ENSMUST00000204973 672 ntBASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm19091-201ENSMUST00000208120 978 ntBASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm2875-201ENSMUST00000211333 360 ntBASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm2553-201ENSMUST00000215986 605 ntBASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm6867-201ENSMUST00000219165 425 ntBASIC11.87□□□□□ -0.51
Ebf1Q07802 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.87□□□□□ -0.51
Ebf1Q07802 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.87□□□□□ -0.51
Ebf1Q07802 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.87□□□□□ -0.51
Ebf1Q07802 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ebf1Q07802 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.87□□□□□ -0.51
Ebf1Q07802 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf1Q07802 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf1Q07802 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.86□□□□□ -0.51
Ebf1Q07802 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Mir1956-201ENSMUST00000157748 65 ntBASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm4310-201ENSMUST00000177847 889 ntBASIC11.86□□□□□ -0.51
Ebf1Q07802 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm44329-201ENSMUST00000197469 112 ntBASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.86□□□□□ -0.51
Ebf1Q07802 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.86□□□□□ -0.51
Ebf1Q07802 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.86□□□□□ -0.51
Ebf1Q07802 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ebf1Q07802 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf1Q07802 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms