Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.62□□□□□ -0.39
Col9a2Q07643 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Col9a2Q07643 Gm26013-201ENSMUST00000104404 119 ntBASIC12.62□□□□□ -0.39
Col9a2Q07643 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.62□□□□□ -0.39
Col9a2Q07643 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.62□□□□□ -0.39
Col9a2Q07643 Gm8492-201ENSMUST00000182375 987 ntBASIC12.62□□□□□ -0.39
Col9a2Q07643 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.62□□□□□ -0.39
Col9a2Q07643 Gm43852-201ENSMUST00000202098 917 ntBASIC12.62□□□□□ -0.39
Col9a2Q07643 Gm45594-201ENSMUST00000211717 241 ntBASIC12.62□□□□□ -0.39
Col9a2Q07643 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Col9a2Q07643 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col9a2Q07643 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col9a2Q07643 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.62□□□□□ -0.39
Col9a2Q07643 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Col9a2Q07643 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a2Q07643 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Gm12795-201ENSMUST00000117594 539 ntBASIC12.61□□□□□ -0.39
Col9a2Q07643 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.61□□□□□ -0.39
Col9a2Q07643 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Mir6407-201ENSMUST00000184510 101 ntBASIC12.61□□□□□ -0.39
Col9a2Q07643 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Gm5100-201ENSMUST00000195631 589 ntBASIC12.61□□□□□ -0.39
Col9a2Q07643 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.61□□□□□ -0.39
Col9a2Q07643 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.61□□□□□ -0.39
Col9a2Q07643 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col9a2Q07643 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a2Q07643 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.6□□□□□ -0.39
Col9a2Q07643 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm29410-201ENSMUST00000188383 694 ntBASIC12.6□□□□□ -0.39
Col9a2Q07643 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms