Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Gm43966-201ENSMUST00000203301 612 ntBASIC11.07□□□□□ -0.64
Cxcr5Q04683 Gm43962-201ENSMUST00000203898 190 ntBASIC11.07□□□□□ -0.64
Cxcr5Q04683 Gm18935-201ENSMUST00000212692 664 ntBASIC11.07□□□□□ -0.64
Cxcr5Q04683 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.07□□□□□ -0.64
Cxcr5Q04683 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.07□□□□□ -0.64
Cxcr5Q04683 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Cxcr5Q04683 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.06□□□□□ -0.64
Cxcr5Q04683 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Gm14109-201ENSMUST00000118814 309 ntBASIC11.06□□□□□ -0.64
Cxcr5Q04683 Gm14726-201ENSMUST00000120623 896 ntBASIC11.06□□□□□ -0.64
Cxcr5Q04683 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.06□□□□□ -0.64
Cxcr5Q04683 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Gm27046-201ENSMUST00000182160 463 ntBASIC11.06□□□□□ -0.64
Cxcr5Q04683 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.06□□□□□ -0.64
Cxcr5Q04683 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Gm5705-201ENSMUST00000066241 711 ntBASIC11.06□□□□□ -0.64
Cxcr5Q04683 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.06□□□□□ -0.64
Cxcr5Q04683 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcr5Q04683 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.05□□□□□ -0.64
Cxcr5Q04683 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.05□□□□□ -0.64
Cxcr5Q04683 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcr5Q04683 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms