Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm15549-201ENSMUST00000121595 622 ntBASIC13.22□□□□□ -0.29
GabpaQ00422 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.22□□□□□ -0.29
GabpaQ00422 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.22□□□□□ -0.29
GabpaQ00422 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Gm18065-201ENSMUST00000221395 526 ntBASIC13.22□□□□□ -0.29
GabpaQ00422 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.22□□□□□ -0.29
GabpaQ00422 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
GabpaQ00422 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GabpaQ00422 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GabpaQ00422 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GabpaQ00422 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.21□□□□□ -0.29
GabpaQ00422 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.21□□□□□ -0.29
GabpaQ00422 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
GabpaQ00422 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.21□□□□□ -0.29
GabpaQ00422 Gm11675-201ENSMUST00000121873 832 ntBASIC13.21□□□□□ -0.29
GabpaQ00422 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.21□□□□□ -0.29
GabpaQ00422 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.21□□□□□ -0.29
GabpaQ00422 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.21□□□□□ -0.29
GabpaQ00422 Gm26134-201ENSMUST00000178484 110 ntBASIC13.21□□□□□ -0.29
GabpaQ00422 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
GabpaQ00422 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.21□□□□□ -0.29
GabpaQ00422 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.21□□□□□ -0.29
GabpaQ00422 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.21□□□□□ -0.29
GabpaQ00422 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
GabpaQ00422 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.21□□□□□ -0.3
GabpaQ00422 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GabpaQ00422 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.21□□□□□ -0.3
GabpaQ00422 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
GabpaQ00422 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GabpaQ00422 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
GabpaQ00422 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
GabpaQ00422 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GabpaQ00422 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.2□□□□□ -0.3
GabpaQ00422 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.2□□□□□ -0.3
GabpaQ00422 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
GabpaQ00422 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
GabpaQ00422 Gm11700-201ENSMUST00000119409 403 ntBASIC13.2□□□□□ -0.3
GabpaQ00422 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.2□□□□□ -0.3
GabpaQ00422 Gm16397-201ENSMUST00000122201 494 ntBASIC13.2□□□□□ -0.3
GabpaQ00422 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.2□□□□□ -0.3
GabpaQ00422 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
GabpaQ00422 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.2□□□□□ -0.3
GabpaQ00422 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.2□□□□□ -0.3
GabpaQ00422 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.2□□□□□ -0.3
GabpaQ00422 Gm25492-201ENSMUST00000157383 129 ntBASIC13.2□□□□□ -0.3
GabpaQ00422 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
GabpaQ00422 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.2□□□□□ -0.3
GabpaQ00422 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.2□□□□□ -0.3
GabpaQ00422 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Mir6407-201ENSMUST00000184510 101 ntBASIC13.2□□□□□ -0.3
GabpaQ00422 Gm29410-201ENSMUST00000188383 694 ntBASIC13.2□□□□□ -0.3
GabpaQ00422 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.2□□□□□ -0.3
GabpaQ00422 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.2□□□□□ -0.3
GabpaQ00422 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
GabpaQ00422 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GabpaQ00422 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.2□□□□□ -0.3
GabpaQ00422 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms