Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.97□□□□□ -0.81
Smn1P97801 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smn1P97801 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.97□□□□□ -0.81
Smn1P97801 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Gm6754-201ENSMUST00000117124 913 ntBASIC9.97□□□□□ -0.81
Smn1P97801 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.97□□□□□ -0.81
Smn1P97801 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.97□□□□□ -0.81
Smn1P97801 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Smn1P97801 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Gm9192-201ENSMUST00000183221 985 ntBASIC9.97□□□□□ -0.81
Smn1P97801 Gm38314-201ENSMUST00000195709 625 ntBASIC9.97□□□□□ -0.81
Smn1P97801 CT009738.1-201ENSMUST00000219031 809 ntBASIC9.97□□□□□ -0.81
Smn1P97801 Gm807-202ENSMUST00000224929 408 ntBASIC9.97□□□□□ -0.81
Smn1P97801 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.97□□□□□ -0.81
Smn1P97801 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smn1P97801 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC9.97□□□□□ -0.81
Smn1P97801 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.97□□□□□ -0.81
Smn1P97801 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smn1P97801 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smn1P97801 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smn1P97801 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smn1P97801 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Smn1P97801 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smn1P97801 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.96□□□□□ -0.82
Smn1P97801 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC9.96□□□□□ -0.82
Smn1P97801 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Smn1P97801 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.96□□□□□ -0.82
Smn1P97801 Gm8602-201ENSMUST00000184045 607 ntBASIC9.96□□□□□ -0.82
Smn1P97801 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.96□□□□□ -0.82
Smn1P97801 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Smn1P97801 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.96□□□□□ -0.82
Smn1P97801 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.96□□□□□ -0.82
Smn1P97801 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.96□□□□□ -0.82
Smn1P97801 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Smn1P97801 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Smn1P97801 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Smn1P97801 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
Smn1P97801 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Smn1P97801 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Smn1P97801 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.96□□□□□ -0.82
Smn1P97801 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smn1P97801 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.95□□□□□ -0.82
Smn1P97801 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Smn1P97801 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Gm25214-201ENSMUST00000104573 129 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Gm11531-201ENSMUST00000117614 555 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Gm14660-201ENSMUST00000119809 575 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms