Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-3P97334 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-3P97334 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-3P97334 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-3P97334 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-3P97334 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-3P97334 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-3P97334 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.59□□□□□ -0.07
Nkx2-3P97334 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm15003-201ENSMUST00000118884 446 ntBASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm15197-201ENSMUST00000120526 478 ntBASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm13284-201ENSMUST00000121020 547 ntBASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm26976-201ENSMUST00000182929 908 ntBASIC14.59□□□□□ -0.07
Nkx2-3P97334 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm42660-201ENSMUST00000197733 947 ntBASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm45574-201ENSMUST00000210921 331 ntBASIC14.59□□□□□ -0.07
Nkx2-3P97334 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-3P97334 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.58□□□□□ -0.07
Nkx2-3P97334 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-3P97334 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-3P97334 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-3P97334 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-3P97334 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.58□□□□□ -0.07
Nkx2-3P97334 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.58□□□□□ -0.07
Nkx2-3P97334 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-3P97334 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Snord23-201ENSMUST00000116828 109 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Defa-ps4-201ENSMUST00000118021 183 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nkx2-3P97334 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm13445-201ENSMUST00000121664 307 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Olfml3-204ENSMUST00000169286 874 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm20392-201ENSMUST00000173047 701 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm28833-201ENSMUST00000189671 559 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm37365-201ENSMUST00000193109 409 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm17889-201ENSMUST00000198410 598 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm43671-201ENSMUST00000200422 433 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm45500-201ENSMUST00000211676 803 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Gm6390-201ENSMUST00000215034 589 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.58□□□□□ -0.08
Nkx2-3P97334 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.58□□□□□ -0.08
Nkx2-3P97334 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Nkx2-3P97334 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.58□□□□□ -0.08
Nkx2-3P97334 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms