Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.28□□□□□ -0.76
Hist1h3bP84228 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.28□□□□□ -0.76
Hist1h3bP84228 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Hist1h3bP84228 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hist1h3bP84228 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Gm11509-201ENSMUST00000117358 325 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 Gm14130-201ENSMUST00000118417 987 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 Gm43184-201ENSMUST00000197247 542 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Gm43002-201ENSMUST00000200310 155 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Gm45433-201ENSMUST00000209386 247 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Gm9797-202ENSMUST00000218003 294 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.27□□□□□ -0.77
Hist1h3bP84228 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.27□□□□□ -0.77
Hist1h3bP84228 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hist1h3bP84228 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.26□□□□□ -0.77
Hist1h3bP84228 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Hist1h3bP84228 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.26□□□□□ -0.77
Hist1h3bP84228 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Hist1h3bP84228 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.26□□□□□ -0.77
Hist1h3bP84228 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Gm4310-201ENSMUST00000177847 889 ntBASIC10.26□□□□□ -0.77
Hist1h3bP84228 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hist1h3bP84228 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms