Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
SgcbP82349 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
SgcbP82349 Gm9062-201ENSMUST00000117712 727 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Gm13461-201ENSMUST00000120980 662 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.46□□□□□ -0.73
SgcbP82349 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.46□□□□□ -0.73
SgcbP82349 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.46□□□□□ -0.73
SgcbP82349 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Mir3102-201ENSMUST00000175555 104 ntBASIC10.46□□□□□ -0.73
SgcbP82349 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Gm5733-201ENSMUST00000190232 939 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Gm37246-201ENSMUST00000192665 835 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Gm6450-201ENSMUST00000200896 574 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Gm6312-201ENSMUST00000204060 1194 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.46□□□□□ -0.73
SgcbP82349 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
SgcbP82349 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Spcs1-203ENSMUST00000226374 592 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
SgcbP82349 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.46□□□□□ -0.73
SgcbP82349 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
SgcbP82349 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
SgcbP82349 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
SgcbP82349 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
SgcbP82349 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SgcbP82349 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SgcbP82349 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SgcbP82349 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.46□□□□□ -0.74
SgcbP82349 Matn2-203ENSMUST00000226766 3252 ntBASIC10.46□□□□□ -0.74
SgcbP82349 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
SgcbP82349 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcbP82349 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.45□□□□□ -0.74
SgcbP82349 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.45□□□□□ -0.74
SgcbP82349 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.45□□□□□ -0.74
SgcbP82349 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Gm12813-201ENSMUST00000119615 902 ntBASIC10.45□□□□□ -0.74
SgcbP82349 Gm11941-201ENSMUST00000119904 610 ntBASIC10.45□□□□□ -0.74
SgcbP82349 Gm4310-201ENSMUST00000177847 889 ntBASIC10.45□□□□□ -0.74
SgcbP82349 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
SgcbP82349 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Mir6979-201ENSMUST00000183927 56 ntBASIC10.45□□□□□ -0.74
SgcbP82349 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.45□□□□□ -0.74
SgcbP82349 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.45□□□□□ -0.74
SgcbP82349 Gm45610-201ENSMUST00000209227 784 ntBASIC10.45□□□□□ -0.74
SgcbP82349 Gm5369-201ENSMUST00000217499 588 ntBASIC10.45□□□□□ -0.74
SgcbP82349 AC172027.1-201ENSMUST00000217659 337 ntBASIC10.45□□□□□ -0.74
SgcbP82349 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
SgcbP82349 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.45□□□□□ -0.74
SgcbP82349 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms