Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.49□□□□□ -0.57
Shox2P70390 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Shox2P70390 Gm3329-201ENSMUST00000159873 556 ntBASIC11.49□□□□□ -0.57
Shox2P70390 Gm26927-201ENSMUST00000182385 965 ntBASIC11.49□□□□□ -0.57
Shox2P70390 Gm27701-201ENSMUST00000184498 110 ntBASIC11.49□□□□□ -0.57
Shox2P70390 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.49□□□□□ -0.57
Shox2P70390 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Shox2P70390 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.49□□□□□ -0.57
Shox2P70390 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.49□□□□□ -0.57
Shox2P70390 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.49□□□□□ -0.57
Shox2P70390 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.49□□□□□ -0.57
Shox2P70390 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.49□□□□□ -0.57
Shox2P70390 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.49□□□□□ -0.57
Shox2P70390 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Shox2P70390 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Shox2P70390 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Shox2P70390 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.48□□□□□ -0.57
Shox2P70390 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Shox2P70390 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.48□□□□□ -0.57
Shox2P70390 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Shox2P70390 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Shox2P70390 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.48□□□□□ -0.57
Shox2P70390 Gm29705-201ENSMUST00000212598 474 ntBASIC11.48□□□□□ -0.57
Shox2P70390 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.48□□□□□ -0.57
Shox2P70390 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.48□□□□□ -0.57
Shox2P70390 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Shox2P70390 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Shox2P70390 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.48□□□□□ -0.57
Shox2P70390 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.48□□□□□ -0.57
Shox2P70390 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Shox2P70390 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shox2P70390 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.47□□□□□ -0.57
Shox2P70390 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Shox2P70390 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shox2P70390 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shox2P70390 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.47□□□□□ -0.57
Shox2P70390 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.47□□□□□ -0.57
Shox2P70390 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shox2P70390 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shox2P70390 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shox2P70390 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shox2P70390 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.47□□□□□ -0.57
Shox2P70390 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shox2P70390 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.47□□□□□ -0.57
Shox2P70390 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms