Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.05□□□□□ -0.48
Smad1P70340 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smad1P70340 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.05□□□□□ -0.48
Smad1P70340 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smad1P70340 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Smad1P70340 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Gm15131-201ENSMUST00000119124 595 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 Gm6963-201ENSMUST00000147879 379 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.04□□□□□ -0.48
Smad1P70340 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.04□□□□□ -0.48
Smad1P70340 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.04□□□□□ -0.48
Smad1P70340 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Smad1P70340 Gm7593-201ENSMUST00000187246 644 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Gm32999-201ENSMUST00000192693 562 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Gm17812-201ENSMUST00000204935 318 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.04□□□□□ -0.48
Smad1P70340 Gm19994-201ENSMUST00000217086 586 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.04□□□□□ -0.48
Smad1P70340 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smad1P70340 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smad1P70340 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.03□□□□□ -0.48
Smad1P70340 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.03□□□□□ -0.48
Smad1P70340 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smad1P70340 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Smad1P70340 Gm12015-201ENSMUST00000117065 843 ntBASIC12.03□□□□□ -0.48
Smad1P70340 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.03□□□□□ -0.48
Smad1P70340 Gm12208-201ENSMUST00000122004 163 ntBASIC12.03□□□□□ -0.48
Smad1P70340 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smad1P70340 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.03□□□□□ -0.48
Smad1P70340 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.03□□□□□ -0.48
Smad1P70340 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Gm37666-201ENSMUST00000194110 866 ntBASIC12.03□□□□□ -0.48
Smad1P70340 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.03□□□□□ -0.48
Smad1P70340 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smad1P70340 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smad1P70340 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Smad1P70340 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms