Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm12380-201ENSMUST00000119012 544 ntBASIC9.75□□□□□ -0.85
Pdlim4P70271 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm8343-201ENSMUST00000182705 994 ntBASIC9.75□□□□□ -0.85
Pdlim4P70271 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm28450-201ENSMUST00000187349 638 ntBASIC9.75□□□□□ -0.85
Pdlim4P70271 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.75□□□□□ -0.85
Pdlim4P70271 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm2553-201ENSMUST00000215986 605 ntBASIC9.75□□□□□ -0.85
Pdlim4P70271 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm5705-201ENSMUST00000066241 711 ntBASIC9.75□□□□□ -0.85
Pdlim4P70271 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.75□□□□□ -0.85
Pdlim4P70271 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.75□□□□□ -0.85
Pdlim4P70271 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pdlim4P70271 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Pdlim4P70271 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm12266-201ENSMUST00000120311 962 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm7003-201ENSMUST00000195089 312 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm19208-201ENSMUST00000213861 912 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 AC159747.1-201ENSMUST00000219903 265 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm270-201ENSMUST00000223010 976 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm807-202ENSMUST00000224929 408 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Pdlim4P70271 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.74□□□□□ -0.85
Pdlim4P70271 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pdlim4P70271 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.74□□□□□ -0.85
Pdlim4P70271 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.73□□□□□ -0.85
Pdlim4P70271 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Pdlim4P70271 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Pdlim4P70271 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms