Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Ybx1P62960 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Ybx1P62960 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.95□□□□□ -0.5
Ybx1P62960 Gm14219-201ENSMUST00000120414 288 ntBASIC11.95□□□□□ -0.5
Ybx1P62960 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 Gm10807-201ENSMUST00000177134 795 ntBASIC11.95□□□□□ -0.5
Ybx1P62960 Gm5982-201ENSMUST00000196234 512 ntBASIC11.95□□□□□ -0.5
Ybx1P62960 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.95□□□□□ -0.5
Ybx1P62960 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ybx1P62960 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ybx1P62960 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.94□□□□□ -0.5
Ybx1P62960 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.94□□□□□ -0.5
Ybx1P62960 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.94□□□□□ -0.5
Ybx1P62960 Gm14441-201ENSMUST00000121960 540 ntBASIC11.94□□□□□ -0.5
Ybx1P62960 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.94□□□□□ -0.5
Ybx1P62960 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.94□□□□□ -0.5
Ybx1P62960 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.94□□□□□ -0.5
Ybx1P62960 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.94□□□□□ -0.5
Ybx1P62960 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ybx1P62960 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.94□□□□□ -0.5
Ybx1P62960 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.94□□□□□ -0.5
Ybx1P62960 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ybx1P62960 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ybx1P62960 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.94□□□□□ -0.5
Ybx1P62960 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ybx1P62960 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.94□□□□□ -0.5
Ybx1P62960 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ybx1P62960 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ybx1P62960 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ybx1P62960 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Gm13600-201ENSMUST00000117949 744 ntBASIC11.93□□□□□ -0.5
Ybx1P62960 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.93□□□□□ -0.5
Ybx1P62960 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms