Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
Rpl39P62892 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm18806-201ENSMUST00000207607 1775 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rpl39P62892 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm13875-201ENSMUST00000120162 282 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Gm11960-201ENSMUST00000122068 925 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC8.28□□□□□ -1.08
Rpl39P62892 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm9002-201ENSMUST00000178437 499 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rpl39P62892 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Gtpbp10-211ENSMUST00000198799 648 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Gm45059-201ENSMUST00000205558 1077 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Gm7619-201ENSMUST00000210649 1282 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 AC166095.1-201ENSMUST00000223731 1241 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm9996-201ENSMUST00000070359 913 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 n-R5s195-201ENSMUST00000082891 119 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rpl39P62892 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.28□□□□□ -1.08
Rpl39P62892 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Rpl39P62892 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.28□□□□□ -1.08
Rpl39P62892 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl39P62892 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Rpl39P62892 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC8.27□□□□□ -1.08
Rpl39P62892 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl39P62892 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl39P62892 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Rpl39P62892 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl39P62892 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl39P62892 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 Gm43860-201ENSMUST00000201742 2705 ntBASIC8.27□□□□□ -1.09
Rpl39P62892 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 AC131586.1-201ENSMUST00000228844 2964 ntBASIC8.27□□□□□ -1.09
Rpl39P62892 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC8.27□□□□□ -1.09
Rpl39P62892 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rpl39P62892 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.27□□□□□ -1.09
Rpl39P62892 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 Gm5419-201ENSMUST00000119301 527 ntBASIC8.27□□□□□ -1.09
Rpl39P62892 Gm12164-201ENSMUST00000121695 551 ntBASIC8.27□□□□□ -1.09
Rpl39P62892 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC8.27□□□□□ -1.09
Rpl39P62892 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rpl39P62892 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC8.27□□□□□ -1.09
Rpl39P62892 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC8.27□□□□□ -1.09
Rpl39P62892 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC8.27□□□□□ -1.09
Rpl39P62892 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl39P62892 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rpl39P62892 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms