Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.37□□□□□ -0.75
Sf3b6P59708 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Sf3b6P59708 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.37□□□□□ -0.75
Sf3b6P59708 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sf3b6P59708 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sf3b6P59708 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.37□□□□□ -0.75
Sf3b6P59708 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms