Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC15.66■□□□□ 0.1
Nphp4P59240 AC154572.1-201ENSMUST00000226098 1204 ntBASIC15.66■□□□□ 0.1
Nphp4P59240 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nphp4P59240 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nphp4P59240 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Nphp4P59240 Gm43152-201ENSMUST00000202495 1638 ntBASIC15.66■□□□□ 0.1
Nphp4P59240 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Gm43727-201ENSMUST00000198021 2647 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Mup-ps29-201ENSMUST00000122281 202 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC15.65■□□□□ 0.1
Nphp4P59240 Gm16030-201ENSMUST00000159098 603 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Gm24809-201ENSMUST00000175318 271 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 Gm22877-201ENSMUST00000175451 105 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC15.65■□□□□ 0.1
Nphp4P59240 Gm18463-201ENSMUST00000207258 474 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Nphp4P59240 Gm18460-201ENSMUST00000208088 464 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 AC158392.3-201ENSMUST00000224271 1284 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 Gm9544-201ENSMUST00000223349 2482 ntBASIC15.65■□□□□ 0.1
Nphp4P59240 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nphp4P59240 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nphp4P59240 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nphp4P59240 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nphp4P59240 Snord17-201ENSMUST00000104526 238 ntBASIC15.64■□□□□ 0.09
Nphp4P59240 Gm25562-201ENSMUST00000104608 133 ntBASIC15.64■□□□□ 0.09
Nphp4P59240 Snord23-201ENSMUST00000116828 109 ntBASIC15.64■□□□□ 0.09
Nphp4P59240 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.64■□□□□ 0.09
Nphp4P59240 Gm25343-201ENSMUST00000157460 107 ntBASIC15.64■□□□□ 0.09
Nphp4P59240 Gm22846-201ENSMUST00000157706 270 ntBASIC15.64■□□□□ 0.09
Nphp4P59240 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC15.64■□□□□ 0.09
Nphp4P59240 Gm5298-201ENSMUST00000201122 892 ntBASIC15.64■□□□□ 0.09
Nphp4P59240 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC15.64■□□□□ 0.09
Nphp4P59240 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC15.64■□□□□ 0.09
Nphp4P59240 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.64■□□□□ 0.09
Nphp4P59240 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC15.64■□□□□ 0.09
Nphp4P59240 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nphp4P59240 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Gm13022-201ENSMUST00000121181 285 ntBASIC15.63■□□□□ 0.09
Nphp4P59240 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC15.63■□□□□ 0.09
Nphp4P59240 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC15.63■□□□□ 0.09
Nphp4P59240 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Nphp4P59240 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nphp4P59240 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms