Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.03□□□□□ -0.64
Nup43P59235 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.03□□□□□ -0.64
Nup43P59235 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.03□□□□□ -0.64
Nup43P59235 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Nup43P59235 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.03□□□□□ -0.64
Nup43P59235 Gm37246-201ENSMUST00000192665 835 ntBASIC11.03□□□□□ -0.64
Nup43P59235 Gm45113-201ENSMUST00000207518 165 ntBASIC11.03□□□□□ -0.64
Nup43P59235 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.03□□□□□ -0.64
Nup43P59235 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.03□□□□□ -0.64
Nup43P59235 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nup43P59235 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.03□□□□□ -0.64
Nup43P59235 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nup43P59235 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Nup43P59235 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nup43P59235 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nup43P59235 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup43P59235 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup43P59235 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup43P59235 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.02□□□□□ -0.64
Nup43P59235 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.02□□□□□ -0.64
Nup43P59235 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup43P59235 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup43P59235 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup43P59235 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Nup43P59235 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.02□□□□□ -0.65
Nup43P59235 Mir5120-201ENSMUST00000175020 78 ntBASIC11.02□□□□□ -0.65
Nup43P59235 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Nup43P59235 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Gm38151-201ENSMUST00000195085 289 ntBASIC11.02□□□□□ -0.65
Nup43P59235 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.02□□□□□ -0.65
Nup43P59235 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.02□□□□□ -0.65
Nup43P59235 Gm1821-202ENSMUST00000227415 750 ntBASIC11.02□□□□□ -0.65
Nup43P59235 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Nup43P59235 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nup43P59235 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.02□□□□□ -0.65
Nup43P59235 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.02□□□□□ -0.65
Nup43P59235 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.02□□□□□ -0.65
Nup43P59235 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nup43P59235 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup43P59235 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nup43P59235 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nup43P59235 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nup43P59235 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.01□□□□□ -0.65
Nup43P59235 Gm23251-201ENSMUST00000103773 110 ntBASIC11.01□□□□□ -0.65
Nup43P59235 Gm13809-201ENSMUST00000117921 597 ntBASIC11.01□□□□□ -0.65
Nup43P59235 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nup43P59235 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.01□□□□□ -0.65
Nup43P59235 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Nup43P59235 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.01□□□□□ -0.65
Nup43P59235 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nup43P59235 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nup43P59235 Mir7070-201ENSMUST00000183657 86 ntBASIC11.01□□□□□ -0.65
Nup43P59235 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nup43P59235 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.01□□□□□ -0.65
Nup43P59235 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.01□□□□□ -0.65
Nup43P59235 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.01□□□□□ -0.65
Nup43P59235 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.01□□□□□ -0.65
Nup43P59235 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms