Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Tpm1P58771 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.99□□□□□ -0.33
Tpm1P58771 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tpm1P58771 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tpm1P58771 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tpm1P58771 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.99□□□□□ -0.33
Tpm1P58771 Mir1247-201ENSMUST00000116706 82 ntBASIC12.99□□□□□ -0.33
Tpm1P58771 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.99□□□□□ -0.33
Tpm1P58771 Gm13875-201ENSMUST00000120162 282 ntBASIC12.99□□□□□ -0.33
Tpm1P58771 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Gm25261-201ENSMUST00000157416 134 ntBASIC12.99□□□□□ -0.33
Tpm1P58771 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.99□□□□□ -0.33
Tpm1P58771 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.99□□□□□ -0.33
Tpm1P58771 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Snora73a-201ENSMUST00000082453 205 ntBASIC12.99□□□□□ -0.33
Tpm1P58771 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Tpm1P58771 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Tpm1P58771 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.99□□□□□ -0.33
Tpm1P58771 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Tpm1P58771 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.99□□□□□ -0.33
Tpm1P58771 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tpm1P58771 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Tpm1P58771 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tpm1P58771 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.98□□□□□ -0.33
Tpm1P58771 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.98□□□□□ -0.33
Tpm1P58771 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.98□□□□□ -0.33
Tpm1P58771 Gm2546-201ENSMUST00000182630 991 ntBASIC12.98□□□□□ -0.33
Tpm1P58771 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.98□□□□□ -0.33
Tpm1P58771 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.98□□□□□ -0.33
Tpm1P58771 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.98□□□□□ -0.33
Tpm1P58771 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Tpm1P58771 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.98□□□□□ -0.33
Tpm1P58771 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tpm1P58771 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms