Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.27□□□□□ -0.45
NcanP55066 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NcanP55066 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NcanP55066 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NcanP55066 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.26□□□□□ -0.45
NcanP55066 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NcanP55066 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.26□□□□□ -0.45
NcanP55066 Gm8019-201ENSMUST00000119317 587 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm13284-201ENSMUST00000121020 547 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NcanP55066 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Gm26313-201ENSMUST00000157770 308 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm26174-201ENSMUST00000158415 219 ntBASIC12.26□□□□□ -0.45
NcanP55066 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Gm23647-201ENSMUST00000175042 109 ntBASIC12.26□□□□□ -0.45
NcanP55066 Rn5s-201ENSMUST00000177555 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm22109-201ENSMUST00000177995 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm22291-201ENSMUST00000178027 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm23284-201ENSMUST00000178069 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm25018-201ENSMUST00000179081 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm25212-201ENSMUST00000179432 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm26391-201ENSMUST00000179843 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm6216-201ENSMUST00000182390 687 ntBASIC12.26□□□□□ -0.45
NcanP55066 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.26□□□□□ -0.45
NcanP55066 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.26□□□□□ -0.45
NcanP55066 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm9102-201ENSMUST00000219250 465 ntBASIC12.26□□□□□ -0.45
NcanP55066 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Gm24089-201ENSMUST00000093696 109 ntBASIC12.26□□□□□ -0.45
NcanP55066 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NcanP55066 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Gm13456-201ENSMUST00000118928 1365 ntBASIC12.26□□□□□ -0.45
NcanP55066 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.26□□□□□ -0.45
NcanP55066 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NcanP55066 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.26□□□□□ -0.45
NcanP55066 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.26□□□□□ -0.45
NcanP55066 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.26□□□□□ -0.45
NcanP55066 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NcanP55066 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
NcanP55066 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.25□□□□□ -0.45
NcanP55066 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NcanP55066 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms