Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Snora73a-201ENSMUST00000082453 205 ntBASIC9.66□□□□□ -0.86
Nkx2-1P50220 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.66□□□□□ -0.86
Nkx2-1P50220 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.66□□□□□ -0.86
Nkx2-1P50220 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Gm37201-201ENSMUST00000191845 523 ntBASIC9.65□□□□□ -0.86
Nkx2-1P50220 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.65□□□□□ -0.86
Nkx2-1P50220 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Gm10254-201ENSMUST00000052888 867 ntBASIC9.65□□□□□ -0.86
Nkx2-1P50220 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.65□□□□□ -0.86
Nkx2-1P50220 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.65□□□□□ -0.86
Nkx2-1P50220 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.65□□□□□ -0.86
Nkx2-1P50220 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.65□□□□□ -0.86
Nkx2-1P50220 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nkx2-1P50220 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.65□□□□□ -0.87
Nkx2-1P50220 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nkx2-1P50220 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nkx2-1P50220 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nkx2-1P50220 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.65□□□□□ -0.87
Nkx2-1P50220 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nkx2-1P50220 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Nkx2-1P50220 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nkx2-1P50220 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nkx2-1P50220 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nkx2-1P50220 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nkx2-1P50220 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.65□□□□□ -0.87
Nkx2-1P50220 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.64□□□□□ -0.87
Nkx2-1P50220 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nkx2-1P50220 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms