Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LmnaP48678 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
LmnaP48678 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 Gm7851-201ENSMUST00000117574 323 ntBASIC12.29□□□□□ -0.44
LmnaP48678 Gm13600-201ENSMUST00000117949 744 ntBASIC12.29□□□□□ -0.44
LmnaP48678 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
LmnaP48678 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.29□□□□□ -0.44
LmnaP48678 Gm7902-201ENSMUST00000198842 947 ntBASIC12.29□□□□□ -0.44
LmnaP48678 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.29□□□□□ -0.44
LmnaP48678 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
LmnaP48678 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.29□□□□□ -0.44
LmnaP48678 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LmnaP48678 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LmnaP48678 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.28□□□□□ -0.44
LmnaP48678 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.28□□□□□ -0.44
LmnaP48678 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.28□□□□□ -0.44
LmnaP48678 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
LmnaP48678 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LmnaP48678 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Gm14644-201ENSMUST00000116671 647 ntBASIC12.28□□□□□ -0.44
LmnaP48678 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.28□□□□□ -0.44
LmnaP48678 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Gm20392-201ENSMUST00000173047 701 ntBASIC12.28□□□□□ -0.44
LmnaP48678 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Gm9230-201ENSMUST00000188228 532 ntBASIC12.28□□□□□ -0.44
LmnaP48678 Gm20239-201ENSMUST00000196610 982 ntBASIC12.28□□□□□ -0.44
LmnaP48678 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LmnaP48678 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
LmnaP48678 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.28□□□□□ -0.44
LmnaP48678 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LmnaP48678 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LmnaP48678 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.28□□□□□ -0.44
LmnaP48678 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.28□□□□□ -0.44
LmnaP48678 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LmnaP48678 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LmnaP48678 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.27□□□□□ -0.44
LmnaP48678 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.27□□□□□ -0.44
LmnaP48678 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LmnaP48678 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.27□□□□□ -0.44
LmnaP48678 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.44
LmnaP48678 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LmnaP48678 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
LmnaP48678 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LmnaP48678 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
LmnaP48678 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LmnaP48678 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LmnaP48678 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LmnaP48678 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms