Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfx2P48379 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Gm14665-201ENSMUST00000122294 557 ntBASIC12.25□□□□□ -0.45
Rfx2P48379 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfx2P48379 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.25□□□□□ -0.45
Rfx2P48379 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.25□□□□□ -0.45
Rfx2P48379 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.25□□□□□ -0.45
Rfx2P48379 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfx2P48379 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfx2P48379 Mir7686-201ENSMUST00000200604 57 ntBASIC12.25□□□□□ -0.45
Rfx2P48379 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.25□□□□□ -0.45
Rfx2P48379 Gm45575-201ENSMUST00000210283 548 ntBASIC12.25□□□□□ -0.45
Rfx2P48379 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfx2P48379 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.25□□□□□ -0.45
Rfx2P48379 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.25□□□□□ -0.45
Rfx2P48379 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rfx2P48379 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rfx2P48379 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.25□□□□□ -0.45
Rfx2P48379 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rfx2P48379 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Rfx2P48379 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx2P48379 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Rfx2P48379 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm15207-201ENSMUST00000119259 442 ntBASIC12.24□□□□□ -0.45
Rfx2P48379 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rfx2P48379 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Rfx2P48379 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.24□□□□□ -0.45
Rfx2P48379 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm17391-201ENSMUST00000171036 126 ntBASIC12.24□□□□□ -0.45
Rfx2P48379 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rfx2P48379 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Rfx2P48379 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.24□□□□□ -0.45
Rfx2P48379 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.24□□□□□ -0.45
Rfx2P48379 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.24□□□□□ -0.45
Rfx2P48379 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm45550-201ENSMUST00000209380 946 ntBASIC12.24□□□□□ -0.45
Rfx2P48379 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.24□□□□□ -0.45
Rfx2P48379 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.24□□□□□ -0.45
Rfx2P48379 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.24□□□□□ -0.45
Rfx2P48379 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.24□□□□□ -0.45
Rfx2P48379 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rfx2P48379 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rfx2P48379 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx2P48379 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.23□□□□□ -0.45
Rfx2P48379 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rfx2P48379 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.23□□□□□ -0.45
Rfx2P48379 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx2P48379 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms