Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm6485-201ENSMUST00000160676 439 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm6114-201ENSMUST00000182472 968 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm45113-201ENSMUST00000207518 165 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm5451-201ENSMUST00000080545 579 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.06□□□□□ -0.64
Nkx2-6P43688 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.05□□□□□ -0.64
Nkx2-6P43688 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm12899-201ENSMUST00000120565 551 ntBASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm1848-201ENSMUST00000120711 789 ntBASIC11.05□□□□□ -0.64
Nkx2-6P43688 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm37905-201ENSMUST00000195310 341 ntBASIC11.05□□□□□ -0.64
Nkx2-6P43688 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-6P43688 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-6P43688 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms