Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sox18P43680 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sox18P43680 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sox18P43680 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Gm12036-201ENSMUST00000120008 530 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Sox18P43680 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.45□□□□□ -0.58
Sox18P43680 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sox18P43680 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Gm9022-201ENSMUST00000182482 992 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Gm29516-201ENSMUST00000190402 468 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.45□□□□□ -0.58
Sox18P43680 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.45□□□□□ -0.58
Sox18P43680 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.45□□□□□ -0.58
Sox18P43680 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.45□□□□□ -0.58
Sox18P43680 AC115784.1-201ENSMUST00000227687 1010 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Sox18P43680 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sox18P43680 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Gm28649-201ENSMUST00000189153 1581 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.45□□□□□ -0.58
Sox18P43680 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox18P43680 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox18P43680 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC11.44□□□□□ -0.58
Sox18P43680 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.44□□□□□ -0.58
Sox18P43680 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Gm12579-201ENSMUST00000118040 783 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm16166-201ENSMUST00000118291 787 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm14942-201ENSMUST00000119642 336 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm7722-201ENSMUST00000120646 741 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm13792-201ENSMUST00000121350 423 ntBASIC11.44□□□□□ -0.58
Sox18P43680 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.44□□□□□ -0.58
Sox18P43680 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Gm18201-201ENSMUST00000174735 875 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm22693-201ENSMUST00000175049 442 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm26989-201ENSMUST00000182608 749 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Mir6407-201ENSMUST00000184510 101 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm28941-201ENSMUST00000185536 1017 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm29664-201ENSMUST00000191125 463 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.44□□□□□ -0.58
Sox18P43680 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Gm8956-201ENSMUST00000203939 825 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm34701-201ENSMUST00000204213 849 ntBASIC11.44□□□□□ -0.58
Sox18P43680 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sox18P43680 AC096628.1-201ENSMUST00000226060 641 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sox18P43680 Gm5705-201ENSMUST00000066241 711 ntBASIC11.44□□□□□ -0.58
Sox18P43680 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sox18P43680 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Sox18P43680 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.44□□□□□ -0.58
Sox18P43680 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox18P43680 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms