Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
HttP42859 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC12.01□□□□□ -0.49
HttP42859 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.01□□□□□ -0.49
HttP42859 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Gm26943-201ENSMUST00000182295 957 ntBASIC12.01□□□□□ -0.49
HttP42859 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC12.01□□□□□ -0.49
HttP42859 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HttP42859 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
HttP42859 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Gm6881-201ENSMUST00000121811 833 ntBASIC12.01□□□□□ -0.49
HttP42859 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC12.01□□□□□ -0.49
HttP42859 Gm16560-201ENSMUST00000159115 404 ntBASIC12.01□□□□□ -0.49
HttP42859 Gm17147-201ENSMUST00000164176 432 ntBASIC12.01□□□□□ -0.49
HttP42859 Gm8707-201ENSMUST00000183325 980 ntBASIC12.01□□□□□ -0.49
HttP42859 Gm43965-201ENSMUST00000203779 789 ntBASIC12.01□□□□□ -0.49
HttP42859 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.01□□□□□ -0.49
HttP42859 Gm5424-201ENSMUST00000053865 1240 ntBASIC12.01□□□□□ -0.49
HttP42859 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
HttP42859 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC12.01□□□□□ -0.49
HttP42859 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
HttP42859 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Gm4925-202ENSMUST00000168843 1561 ntBASIC12.01□□□□□ -0.49
HttP42859 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC12□□□□□ -0.49
HttP42859 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12□□□□□ -0.49
HttP42859 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC12□□□□□ -0.49
HttP42859 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC12□□□□□ -0.49
HttP42859 Gm38314-201ENSMUST00000195709 625 ntBASIC12□□□□□ -0.49
HttP42859 Gm45225-201ENSMUST00000206852 1139 ntBASIC12□□□□□ -0.49
HttP42859 Gm44658-201ENSMUST00000207965 637 ntBASIC12□□□□□ -0.49
HttP42859 Gm6653-201ENSMUST00000218063 1288 ntBASIC12□□□□□ -0.49
HttP42859 AC159002.1-201ENSMUST00000226714 924 ntBASIC12□□□□□ -0.49
HttP42859 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12□□□□□ -0.49
HttP42859 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
HttP42859 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
HttP42859 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12□□□□□ -0.49
HttP42859 Gm15033-201ENSMUST00000118188 673 ntBASIC12□□□□□ -0.49
HttP42859 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12□□□□□ -0.49
HttP42859 Gm29548-201ENSMUST00000187012 694 ntBASIC12□□□□□ -0.49
HttP42859 Gm28105-201ENSMUST00000187788 694 ntBASIC12□□□□□ -0.49
HttP42859 Gm5845-201ENSMUST00000195812 796 ntBASIC12□□□□□ -0.49
HttP42859 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC12□□□□□ -0.49
HttP42859 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12□□□□□ -0.49
HttP42859 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12□□□□□ -0.49
HttP42859 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12□□□□□ -0.49
HttP42859 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Gm43242-201ENSMUST00000199507 1776 ntBASIC12□□□□□ -0.49
HttP42859 Gm11919-201ENSMUST00000117609 721 ntBASIC12□□□□□ -0.49
HttP42859 Gm25804-201ENSMUST00000122785 188 ntBASIC12□□□□□ -0.49
HttP42859 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12□□□□□ -0.49
HttP42859 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Olfml3-204ENSMUST00000169286 874 ntBASIC12□□□□□ -0.49
HttP42859 Gm34248-201ENSMUST00000200027 474 ntBASIC12□□□□□ -0.49
HttP42859 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
HttP42859 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
HttP42859 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
HttP42859 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.99□□□□□ -0.49
HttP42859 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.99□□□□□ -0.49
HttP42859 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms