Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox6P40645 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.97□□□□□ -0.65
Sox6P40645 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.97□□□□□ -0.65
Sox6P40645 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox6P40645 Gm23912-201ENSMUST00000104687 87 ntBASIC10.97□□□□□ -0.65
Sox6P40645 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.97□□□□□ -0.65
Sox6P40645 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.97□□□□□ -0.65
Sox6P40645 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.97□□□□□ -0.65
Sox6P40645 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.97□□□□□ -0.65
Sox6P40645 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox6P40645 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox6P40645 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Sox6P40645 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.97□□□□□ -0.65
Sox6P40645 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox6P40645 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox6P40645 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Sox6P40645 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Sox6P40645 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sox6P40645 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.96□□□□□ -0.65
Sox6P40645 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sox6P40645 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.96□□□□□ -0.65
Sox6P40645 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Gm25668-201ENSMUST00000157700 129 ntBASIC10.96□□□□□ -0.65
Sox6P40645 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox6P40645 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sox6P40645 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sox6P40645 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox6P40645 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms