Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.29□□□□□ -0.6
TfamP40630 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.29□□□□□ -0.6
TfamP40630 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TfamP40630 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TfamP40630 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Gm11660-201ENSMUST00000120955 412 ntBASIC11.29□□□□□ -0.6
TfamP40630 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TfamP40630 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
TfamP40630 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.29□□□□□ -0.6
TfamP40630 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
TfamP40630 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.29□□□□□ -0.6
TfamP40630 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TfamP40630 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
TfamP40630 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TfamP40630 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.28□□□□□ -0.6
TfamP40630 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TfamP40630 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.28□□□□□ -0.6
TfamP40630 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.28□□□□□ -0.6
TfamP40630 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.28□□□□□ -0.6
TfamP40630 Gm38341-201ENSMUST00000195357 515 ntBASIC11.28□□□□□ -0.6
TfamP40630 Gm44364-201ENSMUST00000198368 141 ntBASIC11.28□□□□□ -0.6
TfamP40630 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.28□□□□□ -0.6
TfamP40630 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.28□□□□□ -0.6
TfamP40630 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.28□□□□□ -0.6
TfamP40630 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.28□□□□□ -0.6
TfamP40630 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
TfamP40630 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
TfamP40630 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.28□□□□□ -0.6
TfamP40630 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.28□□□□□ -0.6
TfamP40630 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TfamP40630 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.28□□□□□ -0.6
TfamP40630 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.28□□□□□ -0.6
TfamP40630 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.28□□□□□ -0.6
TfamP40630 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TfamP40630 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TfamP40630 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TfamP40630 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TfamP40630 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TfamP40630 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TfamP40630 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
TfamP40630 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TfamP40630 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TfamP40630 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TfamP40630 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
TfamP40630 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TfamP40630 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TfamP40630 Gm24255-201ENSMUST00000104481 128 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms