Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Gm8302-201ENSMUST00000119217 852 ntBASIC11.99□□□□□ -0.49
Cxcl12P40224 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.99□□□□□ -0.49
Cxcl12P40224 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.99□□□□□ -0.49
Cxcl12P40224 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.99□□□□□ -0.49
Cxcl12P40224 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Gm43249-201ENSMUST00000200464 458 ntBASIC11.99□□□□□ -0.49
Cxcl12P40224 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl12P40224 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.99□□□□□ -0.49
Cxcl12P40224 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.99□□□□□ -0.49
Cxcl12P40224 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.99□□□□□ -0.49
Cxcl12P40224 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl12P40224 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl12P40224 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm11475-201ENSMUST00000118482 476 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm14441-201ENSMUST00000121960 540 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm7627-201ENSMUST00000183205 999 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm8756-201ENSMUST00000183250 929 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Mir7035-201ENSMUST00000184713 82 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm7904-201ENSMUST00000217049 465 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm6478-201ENSMUST00000099450 742 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl12P40224 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.98□□□□□ -0.49
Cxcl12P40224 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl12P40224 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.98□□□□□ -0.49
Cxcl12P40224 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Cxcl12P40224 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cxcl12P40224 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cxcl12P40224 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.97□□□□□ -0.49
Cxcl12P40224 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Gm23769-201ENSMUST00000104441 121 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 Gm8111-201ENSMUST00000117659 987 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 Gm5395-201ENSMUST00000121650 915 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms