Protein–RNA interactions for Protein: P31245

Hoxa2, Homeobox protein Hox-A2, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa2P31245 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxa2P31245 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm26143-201ENSMUST00000104480 108 ntBASIC12.27□□□□□ -0.45
Hoxa2P31245 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxa2P31245 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxa2P31245 1700013D24Rik-201ENSMUST00000112537 535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm13736-201ENSMUST00000119272 253 ntBASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.27□□□□□ -0.45
Hoxa2P31245 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.27□□□□□ -0.45
Hoxa2P31245 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC12.27□□□□□ -0.45
Hoxa2P31245 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gm18041-201ENSMUST00000218210 618 ntBASIC12.27□□□□□ -0.45
Hoxa2P31245 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC12.27□□□□□ -0.45
Hoxa2P31245 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gpr87-201ENSMUST00000056898 1080 ntBASIC12.27□□□□□ -0.45
Hoxa2P31245 Olfr1120-201ENSMUST00000058737 1018 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hoxa2P31245 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa2P31245 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa2P31245 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa2P31245 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa2P31245 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa2P31245 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm15018-201ENSMUST00000117090 633 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm14021-201ENSMUST00000117683 961 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm13260-201ENSMUST00000117797 1264 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gimap4-203ENSMUST00000118802 771 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm13665-201ENSMUST00000120830 528 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.26□□□□□ -0.45
Hoxa2P31245 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm16129-201ENSMUST00000152628 486 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm16296-201ENSMUST00000159905 325 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa2P31245 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm28724-201ENSMUST00000186149 625 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm38320-201ENSMUST00000192767 1281 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm42640-201ENSMUST00000199792 1195 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa2P31245 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxa2P31245 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxa2P31245 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms