Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Gm44124-201ENSMUST00000204159 472 ntBASIC10.83□□□□□ -0.68
Cd40lgP27548 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.83□□□□□ -0.68
Cd40lgP27548 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.83□□□□□ -0.68
Cd40lgP27548 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Gm5455-201ENSMUST00000058710 715 ntBASIC10.83□□□□□ -0.68
Cd40lgP27548 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cd40lgP27548 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.83□□□□□ -0.68
Cd40lgP27548 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.83□□□□□ -0.68
Cd40lgP27548 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.83□□□□□ -0.68
Cd40lgP27548 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cd40lgP27548 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Cd40lgP27548 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cd40lgP27548 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Gm15711-201ENSMUST00000118889 535 ntBASIC10.82□□□□□ -0.68
Cd40lgP27548 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Gm16505-201ENSMUST00000179981 232 ntBASIC10.82□□□□□ -0.68
Cd40lgP27548 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.82□□□□□ -0.68
Cd40lgP27548 Gm4157-201ENSMUST00000211647 679 ntBASIC10.82□□□□□ -0.68
Cd40lgP27548 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.82□□□□□ -0.68
Cd40lgP27548 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd40lgP27548 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.82□□□□□ -0.68
Cd40lgP27548 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Cd40lgP27548 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cd40lgP27548 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Cd40lgP27548 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm23949-201ENSMUST00000104027 127 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.81□□□□□ -0.68
Cd40lgP27548 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm5616-201ENSMUST00000165252 384 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm17040-202ENSMUST00000170597 889 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm8741-201ENSMUST00000174736 384 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.81□□□□□ -0.68
Cd40lgP27548 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms