Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nfkb1P25799 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Nfkb1P25799 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nfkb1P25799 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nfkb1P25799 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nfkb1P25799 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Nfkb1P25799 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nfkb1P25799 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nfkb1P25799 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Nfkb1P25799 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nfkb1P25799 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm16166-201ENSMUST00000118291 787 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm16071-201ENSMUST00000119589 793 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm7150-201ENSMUST00000122032 981 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.02□□□□□ -0.49
Nfkb1P25799 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm17826-201ENSMUST00000189720 798 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm9645-201ENSMUST00000197131 792 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm6108-201ENSMUST00000208365 367 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nfkb1P25799 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Nfkb1P25799 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.02□□□□□ -0.49
Nfkb1P25799 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nfkb1P25799 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nfkb1P25799 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.01□□□□□ -0.49
Nfkb1P25799 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nfkb1P25799 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.01□□□□□ -0.49
Nfkb1P25799 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.01□□□□□ -0.49
Nfkb1P25799 Gm8459-201ENSMUST00000162504 760 ntBASIC12.01□□□□□ -0.49
Nfkb1P25799 Gm21092-201ENSMUST00000178995 955 ntBASIC12.01□□□□□ -0.49
Nfkb1P25799 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.01□□□□□ -0.49
Nfkb1P25799 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.01□□□□□ -0.49
Nfkb1P25799 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nfkb1P25799 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.01□□□□□ -0.49
Nfkb1P25799 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nfkb1P25799 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nfkb1P25799 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.01□□□□□ -0.49
Nfkb1P25799 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nfkb1P25799 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms