Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TP20293 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.03□□□□□ -0.64
TP20293 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.03□□□□□ -0.64
TP20293 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.03□□□□□ -0.64
TP20293 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.03□□□□□ -0.64
TP20293 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TP20293 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
TP20293 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.03□□□□□ -0.64
TP20293 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TP20293 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TP20293 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.02□□□□□ -0.64
TP20293 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TP20293 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
TP20293 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
TP20293 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
TP20293 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.02□□□□□ -0.64
TP20293 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TP20293 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.02□□□□□ -0.64
TP20293 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TP20293 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.02□□□□□ -0.64
TP20293 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TP20293 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TP20293 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TP20293 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
TP20293 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TP20293 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Gm24749-201ENSMUST00000157838 343 ntBASIC11.02□□□□□ -0.65
TP20293 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.02□□□□□ -0.65
TP20293 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TP20293 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.02□□□□□ -0.65
TP20293 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Gm17827-201ENSMUST00000211825 742 ntBASIC11.02□□□□□ -0.65
TP20293 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.02□□□□□ -0.65
TP20293 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.02□□□□□ -0.65
TP20293 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
TP20293 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
TP20293 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TP20293 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TP20293 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TP20293 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.02□□□□□ -0.65
TP20293 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TP20293 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.02□□□□□ -0.65
TP20293 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.02□□□□□ -0.65
TP20293 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TP20293 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.01□□□□□ -0.65
TP20293 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.01□□□□□ -0.65
TP20293 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.01□□□□□ -0.65
TP20293 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
TP20293 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.01□□□□□ -0.65
TP20293 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TP20293 Gm15236-201ENSMUST00000117309 379 ntBASIC11.01□□□□□ -0.65
TP20293 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.01□□□□□ -0.65
TP20293 Gm8343-201ENSMUST00000182705 994 ntBASIC11.01□□□□□ -0.65
TP20293 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.01□□□□□ -0.65
TP20293 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.01□□□□□ -0.65
TP20293 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.01□□□□□ -0.65
TP20293 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
TP20293 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms