Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
VimP20152 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
VimP20152 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.8□□□□□ -0.52
VimP20152 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.79□□□□□ -0.52
VimP20152 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.79□□□□□ -0.52
VimP20152 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.79□□□□□ -0.52
VimP20152 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.79□□□□□ -0.52
VimP20152 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
VimP20152 Gm12203-201ENSMUST00000118235 598 ntBASIC11.79□□□□□ -0.52
VimP20152 Gm12209-201ENSMUST00000120089 596 ntBASIC11.79□□□□□ -0.52
VimP20152 Gm15610-201ENSMUST00000120584 195 ntBASIC11.79□□□□□ -0.52
VimP20152 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.79□□□□□ -0.52
VimP20152 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
VimP20152 Gm8810-201ENSMUST00000172895 754 ntBASIC11.79□□□□□ -0.52
VimP20152 Mir6392-201ENSMUST00000184924 108 ntBASIC11.79□□□□□ -0.52
VimP20152 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
VimP20152 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.79□□□□□ -0.52
VimP20152 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.79□□□□□ -0.52
VimP20152 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.79□□□□□ -0.52
VimP20152 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.79□□□□□ -0.52
VimP20152 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.79□□□□□ -0.52
VimP20152 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
VimP20152 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
VimP20152 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.79□□□□□ -0.52
VimP20152 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.79□□□□□ -0.52
VimP20152 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
VimP20152 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
VimP20152 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.79□□□□□ -0.52
VimP20152 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VimP20152 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.78□□□□□ -0.52
VimP20152 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
VimP20152 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
VimP20152 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
VimP20152 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
VimP20152 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Gm24934-201ENSMUST00000103764 111 ntBASIC11.78□□□□□ -0.52
VimP20152 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.78□□□□□ -0.52
VimP20152 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
VimP20152 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
VimP20152 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VimP20152 Gm6439-201ENSMUST00000199849 862 ntBASIC11.78□□□□□ -0.52
VimP20152 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms