Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.63□□□□□ -0.87
Cxcl1P12850 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.63□□□□□ -0.87
Cxcl1P12850 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.63□□□□□ -0.87
Cxcl1P12850 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.63□□□□□ -0.87
Cxcl1P12850 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.63□□□□□ -0.87
Cxcl1P12850 Gm8712-201ENSMUST00000221090 701 ntBASIC9.63□□□□□ -0.87
Cxcl1P12850 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.63□□□□□ -0.87
Cxcl1P12850 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.63□□□□□ -0.87
Cxcl1P12850 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cxcl1P12850 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Btrc-209ENSMUST00000224478 2194 ntBASIC9.63□□□□□ -0.87
Cxcl1P12850 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl1P12850 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.62□□□□□ -0.87
Cxcl1P12850 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.62□□□□□ -0.87
Cxcl1P12850 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm18187-201ENSMUST00000196476 984 ntBASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl1P12850 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Gm7046-201ENSMUST00000221351 977 ntBASIC9.62□□□□□ -0.87
Cxcl1P12850 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl1P12850 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms