Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Mir671-201ENSMUST00000102432 98 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Gm15374-201ENSMUST00000119313 844 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 Gm13445-201ENSMUST00000121664 307 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.92□□□□□ -0.34
Hoxc6P10629 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Hoxc6P10629 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc6P10629 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.91□□□□□ -0.34
Hoxc6P10629 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.91□□□□□ -0.34
Hoxc6P10629 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc6P10629 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxc6P10629 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc6P10629 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxc6P10629 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Gm15528-201ENSMUST00000117821 864 ntBASIC12.91□□□□□ -0.34
Hoxc6P10629 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.91□□□□□ -0.34
Hoxc6P10629 Gm15329-201ENSMUST00000121408 155 ntBASIC12.91□□□□□ -0.34
Hoxc6P10629 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.91□□□□□ -0.34
Hoxc6P10629 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxc6P10629 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc6P10629 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc6P10629 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxc6P10629 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc6P10629 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc6P10629 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hoxc6P10629 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc6P10629 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms